CDS

Accession Number TCMCG057C11803
gbkey CDS
Protein Id XP_018473360.1
Location complement(join(13088728..13088817,13089205..13089525,13089610..13089675,13089764..13089847,13089935..13090377,13090380..13090528,13090606..13090670))
Gene LOC108844577
GeneID 108844577
Organism Raphanus sativus

Protein

Length 406aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018617858.1
Definition PREDICTED: LOW QUALITY PROTEIN: transcription factor PIF4-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category K
Description Transcription factor
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03000        [VIEW IN KEGG]
KEGG_ko ko:K16189        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04075        [VIEW IN KEGG]
map04075        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003677        [VIEW IN EMBL-EBI]
GO:0003700        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006355        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009637        [VIEW IN EMBL-EBI]
GO:0009639        [VIEW IN EMBL-EBI]
GO:0009640        [VIEW IN EMBL-EBI]
GO:0009642        [VIEW IN EMBL-EBI]
GO:0009645        [VIEW IN EMBL-EBI]
GO:0009704        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009966        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010017        [VIEW IN EMBL-EBI]
GO:0010114        [VIEW IN EMBL-EBI]
GO:0010161        [VIEW IN EMBL-EBI]
GO:0010244        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010600        [VIEW IN EMBL-EBI]
GO:0010646        [VIEW IN EMBL-EBI]
GO:0010817        [VIEW IN EMBL-EBI]
GO:0010928        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0023051        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0032350        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046885        [VIEW IN EMBL-EBI]
GO:0048583        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0071214        [VIEW IN EMBL-EBI]
GO:0071478        [VIEW IN EMBL-EBI]
GO:0071482        [VIEW IN EMBL-EBI]
GO:0071489        [VIEW IN EMBL-EBI]
GO:0071491        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090354        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0104004        [VIEW IN EMBL-EBI]
GO:0140110        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1903506        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2001141        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAACACCAAGATTGGAATTTTGAGGAGAACTACAATCTGTCCAATAATAGAAGATATATAAGGCCACAAGATGACCTGGTAGAGTTGTTATGGCGAGATGGGCAAGTGGTTCAGCAGAGCCAAACTCATAGAGATCAAACTCAGAAACAGGACTATCAACAAGAAACCCTAAGACCCAACACCTTTCTTGAGGATCAAGAAACCGTCTCTTATCAATACCCTCTAGATGAAGATCCATTTGAATCCGAAGACTTAACCTCACCTTTCTTCTCAACTATAGATCTCCTCCAAAGACCGGCTTCAGAGACGGCTAAGCACGATGCCAGTCCTAAACCTCCTGATCAGGTCATGCCTCCTCCTAAGTTTAGGTTAACGGATTCATCATCAGAAGTCAGGGAACTAGGAAAAGAACAGTACTCGGTGGTGACCGTTGGACCAAGCCACTGCGGTAGCAACCAATCTCAAACCGTTCTCGATGGCTCACTGAGAGCAATCGATGGGAGGCCCTACCCGAACGCAAGTTCGTCATCAGGTGGCTCCTCTGGTTGCAGCTTTGGCAAGAACAACAAAGATATGGCTTGTGTAAGAAGATTCACAGCAGAGCGTAAGAGAAAACATATAATGGACACTGATGAATCTGTGTCTCAGTCAGATGCTATTGGTAATAACAAGTCGAGCCTACGAACAGGATCGACGCGAAGAAGCCGTGCAGCTGAAGTTCATAATCTCTCCGAAAGGAGGAGGAGAGATAGGATCAATGAGAGAATGAAGGCTTTGCAAGAACTAATACCTCACTGCACTAAAACTGACAAAGCTTCAATTTTGGAAGAAGCCATAGATTATTTGAAGTCACTTCAGTTACAAGTTCAAGTTATGTGGATGGGGAGTGGAATGGCTGCTGCTGCAGCGGCTCCTATTATGTTCCCTGGGGTACAGCCTCCTCCACCGTTCATCCGTCAGGTGCAGAGCCCGGTACTGTTGCCTAGATTTCCTGTTATGAACCAGTATGCGATTCAAAACAATCCCGGTTTAGTTTGTCAGAACCCGGTACAAAACCAAGTGTTGTGTAATCGGTTTGATAGATACGTTGGCCTATTCCCACAGATGCAGGCTGCTGCCTCTCAGCCGATGGAGATGTTGAGGTTTGGTTCTTCAGCGGGACAGGAAAGTCAACGCACGTCTGCGCAGACGAAGACCACCGACGGTACTCGTTAG
Protein:  
MEHQDWNFEENYNLSNNRRYIRPQDDLVELLWRDGQVVQQSQTHRDQTQKQDYQQETLRPNTFLEDQETVSWXQYPLDEDPFESEDLTSPFFSTIDLLQRPASETAKHDASPKPPDQVMPPPKFRLTDSSSEVRELGKEQYSVVTVGPSHCGSNQSQTVLDGSLRAIDGRPYPNASSSSGGSSGCSFGKNNKDMACVRRFTAERKRKHIMDTDESVSQSDAIGNNKSSLRTGSTRRSRAAEVHNLSERRRRDRINERMKALQELIPHCTKTDKASILEEAIDYLKSLQLQVQVMWMGSGMAAAAAAPIMFPGVQPPPPFIRQVQSPVLLPRFPVMNQYAIQNNPGLVCQNPVQNQVLCNRFDRYVGLFPQMQAAASQPMEMLRFGSSAGQESQRTSAQTKTTDGTR